Code

For FeNiCs and finite element code to solve the linearized sloshing problem in a container of arbitrary shape, please see the github repositories: Fenics and Finite Element. The finite element code is part of Hari Sundar's hexahedral solver (Utah, CS).

For parallel code regarding the simulations of microtubule assays, please contact Tamar Shinar at UC Riverside.

Below are a list of Matlab code of the various numerical methods developed for the simulation of a viscoelastic Landau-Lifshitz-Navier-Stokes model and of Generalized Langevin Equations. The code are provided as is, with minimal supporting document, and should be acknowledged appropriately. For more details, feel free to contact me directly.

Mean First Passage Time

• Main wrapper
• Simulation manager
• Autocorrelation function

Landau-Lifshitz-Stokes

• Main wrapper
• Simulation manager
• Covariance matrix
• Parameters
• Paths
• Autocorrelation function